PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008242151.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 470aa    MW: 50929.7 Da    PI: 4.6688
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008242151.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.3e-11284329555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     h+++Er RR++i +++ +L+el+P++      + +Ka++L + +eY+k Lq
  XP_008242151.1 284 HSIAERLRREKIAERMKNLQELVPNS-----NRTDKASMLDEIIEYVKFLQ 329
                     99***********************7.....59*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.14E-16277339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.76E-12277333No hitNo description
PROSITE profilePS5088816.901279328IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-15281338IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-8284329IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-12285334IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MDNYLNQFFS SSSWSDVDVK KISSWGCCEC GQPNEMLLNS AGVDEDDNNS SPTYLTNSNH  60
SMESLAAQDA SSIVHDLESD AQDDGKHFKP NLSNGKVDRS FKVENPGLQY DVDIVTPCSL  120
ASLEQLPLNG NMVRTSLSGI EPENVVCNNR EPSMFERFNG DFETLSSISQ LWPLQSYEGV  180
PSSLSPGMGQ HRMCSFGLKG EYGDNGTYAM ANDPNNLAAL VSTEGKQDLQ NYPLPSFASG  240
PQITMTMSGL QSLQQATSTT PSAECTGTGK PRMRARRGQA TDPHSIAERL RREKIAERMK  300
NLQELVPNSN RTDKASMLDE IIEYVKFLQL QIKVLSMSRV GAAGAVVPLI TDTQQANGAN  360
GSSLLPSVGQ VTDISFNEIA LEQVARLMES DVTKAMQHLQ SKGLCLMPIA LADAISTEKK  420
SSSSPAPASD DWKKTGFNDS GLVQNNSSSS SNSSLPEVKQ EAKNHSFAAR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008242151.10.0PREDICTED: transcription factor bHLH112-like
TrEMBLM5WBQ70.0M5WBQ7_PRUPE; Uncharacterized protein
STRINGVIT_11s0016g00380.t011e-146(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF150611314
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58010.13e-58LJRHL1-like 3